A Practical Guide to Overtraining and Fatigue: The Best Biomarkers to Test

Find out which easy-to-check signs and simple tests—resting heart rate, heart-rate variability, sleep and mood tracking, and basic blood tests—best indicate overtraining and fatigue so you can adjust your training.

October 29, 2025
Author
Superpower Science Team
Reviewed by
Julija Rabcuka
PhD Candidate at Oxford University
Creative
Jarvis Wang

Feeling worn down from training is normal. Staying worn down is not. That’s the line between healthy stress and overtraining. If workouts that used to feel crisp now feel like wading through wet cement, your body is sending data. The smart move is to capture it, translate it, and course-correct. Curious which labs and signals actually separate “just tired” from “system overdrawn”?

What Overtraining Really Is

Overtraining isn’t just “too much exercise.” It’s a mismatch between stress and recovery that drifts from short-term fatigue into persistent performance decline, mood changes, sleep issues, more frequent illnesses, and nagging injuries. There’s a progression: functional overreaching (short dip, then bounce), nonfunctional overreaching (longer dip, no clear bounce), and overtraining syndrome (months-long slump). That spectrum matters because lab patterns shift along it. Want to know what your blood can reveal about where you are on that arc?

Fatigue 101: The Mechanisms Under the Hood

Fatigue has layers. Peripheral fatigue lives in the muscle: low glycogen, microdamage, altered calcium handling, and oxidative stress limit contractile power. Central fatigue lives in the brain and spinal cord: neurotransmitter shifts and stress signaling dial down drive to the muscles to protect you. The autonomic nervous system also tilts, with sympathetic overdrive early on and a “flat” parasympathetic pattern when depletion sets in. The immune system weighs in as cytokines nudge the brain toward a sick-day energy economy. Oxygen transport hinges on iron, hemoglobin, and mitochondria; if that axis is off, pace drops at the same heart rate. Want to connect those mechanisms to tests you can actually run?

Labs That Actually Help

Iron Status: Ferritin, Transferrin Saturation, and CBC

Iron sits at the heart of oxygen delivery and mitochondrial throughput. Low ferritin (your iron storage protein) often shows up as reduced stamina before it becomes full anemia. For most adults, ferritin below roughly 30 ng/mL suggests depleted stores; in the setting of inflammation, higher cutoffs are used because ferritin rises with acute-phase signals. Transferrin saturation under about 20% points to poor iron delivery. A complete blood count adds hemoglobin, hematocrit, and red cell indices; per WHO, anemia generally means hemoglobin below 12 g/dL in women and 13 g/dL in men. Endurance athletes, and anyone with heavy menstrual cycles, have higher risk; studies repeatedly link low ferritin to poorer aerobic performance, though thresholds vary by sport and lab. Ready to see how inflammation can blur this picture?

Inflammation Check: C-Reactive Protein

C-reactive protein (CRP) reflects systemic inflammation. A light bump after a hard session is normal; a persistently elevated CRP suggests ongoing tissue stress or infection. High-sensitivity CRP can pick up subtler trends. Because ferritin rises with inflammation, pairing CRP with iron studies avoids false reassurance from “normal” ferritin that’s actually propped up by immune signaling. Testing on a rest day keeps you from misreading a transient spike. If CRP runs high while your training volume is moderate, the source may not be training at all. Curious where muscle damage markers fit in?

Muscle Damage and Repair: Creatine Kinase and Friends

Creatine kinase (CK) leaks from stressed muscle. After a tough lift or long run, it climbs for 24 to 72 hours. Chronically high CK suggests persistent breakdown outpacing repair. But context is everything: trained individuals often run higher baseline CK; Black athletes typically have higher values than White athletes; and a heavy session the day before can dwarf any chronic signal. CK doesn’t equal performance — it flags tissue load and recovery balance. Pairing CK with how you feel and how your pace or power at a given heart rate is trending tells a fuller story. Want to talk stress hormones next?

Stress and Energy Axis: Cortisol, DHEA-S, and the T:C Ratio

Cortisol mobilizes fuel and shapes immune responses during stress. In early overreaching, morning cortisol can run high; with deeper depletion, the pattern may flatten. DHEA-S offers a more stable, longer-view counterpoint to cortisol. The old testosterone-to-cortisol ratio was once hyped as an overtraining index, but research shows it lacks precision for decisions in individuals, especially across different assay methods. Salivary cortisol awakening response can capture circadian dynamics, though standardization varies. The punchline: watch trends, draw morning samples at consistent times, and interpret shifts alongside symptoms and training load. Wonder how thyroid and low energy availability fit into the fatigue puzzle?

Thyroid and Low Energy Availability: TSH, Free T4, Free T3

When energy intake lags behind expenditure for long stretches, the body conserves. One consequence is lower triiodothyronine (free T3), the “go” signal for cellular metabolism. Thyroid-stimulating hormone (TSH) and free T4 can stay normal while T3 drifts low — a pattern seen in relative energy deficiency in sport (REDs). In women, REDs may co-occur with menstrual changes; in men, with low libido and mood dips. Thyroid labs interact with binding proteins and illness, so context rules. Low T3 in an underfueled athlete means something very different than low T3 in critical illness. Curious how basic blood counts round out the picture?

Oxygen Carriers and Nutrient Cofactors: CBC, B12, Folate

If hemoglobin is down, performance is down. Beyond iron, deficiencies in vitamin B12 or folate can cause macrocytic anemia and fatigue. Vegetarians, vegans, and those with malabsorption risk need a closer look. The CBC shows red cell size and distribution; B12 and folate clarify the cause when indices are off. Because symptoms overlap with overtraining, a quick check can prevent months of chasing the wrong lever. Want to see how hydration and kidney markers can masquerade as fatigue?

Hydration, Kidney Strain, and Protein Turnover: Electrolytes, BUN, Creatinine

Blood urea nitrogen (BUN) and creatinine shift with hydration, muscle mass, and training strain. A high BUN-to-creatinine ratio often points to dehydration or high protein turnover. Electrolytes typically hold steady, but heat, high sweat rates, or low sodium intake can tilt sodium and potassium. These markers aren’t specific to overtraining; they simply anchor the physiologic state as you interpret the rest. Tired but curious about bone stress and vitamin D?

Bone and Muscle Resilience: 25-Hydroxyvitamin D

Vitamin D status influences bone remodeling and muscle function. Low 25-hydroxyvitamin D has been linked with stress fracture risk and weaker lower-extremity performance in some studies, though results vary. Because low energy availability also affects bone, pairing vitamin D with menstrual or testosterone history and training load helps spot compounding risks. Could your recovery signals outside the lab be just as useful?

Recovery Signals Beyond Blood: Resting HR, HRV, and Sleep

Morning resting heart rate, heart rate variability, and sleep efficiency reflect autonomic balance and overnight repair. A rising resting heart rate, dropping HRV, and fragmented sleep over several days often precede performance dips. Wearables can amplify the story, but artifacts from alcohol, late meals, and illness are real. Trends matter more than single nights. Ready to time your tests so the data actually mean something?

How to Time and Interpret Tests

Draw iron studies, thyroid tests, and cortisol in the morning on an easy or rest day. Avoid measuring CK, CRP, or liver enzymes within 24 to 48 hours of a punishing session if you want chronic signals rather than acute spikes. Keep conditions consistent: similar time of day, similar hydration, similar sleep. For women with menstrual cycles, iron and some hormone markers vary across the month; tracking in the same phase improves comparability. Altitude camps, illness, and travel shift baselines; note them when you look back. Want to know how sport type and life stage shape the right panel?

Patterns by Sport, Sex, and Life Stage

Endurance athletes often face iron depletion and chronic immune load from high volume. Strength and power athletes see bigger CK swings and may hide fatigue behind short sessions that still strain connective tissue. Men may show dips in free testosterone with prolonged high load; women are more vulnerable to low ferritin, especially with heavy menstrual bleeding. Low energy availability affects both sexes, but menstrual changes are an early warning signal in women. Adolescents in growth spurts can outpace iron intake and sleep needs; perimenopausal shifts can blur thyroid and thermoregulation cues. Different profiles, same principle: match biomarkers to the likely bottleneck. Want examples of what’s worth tracking versus one-offs?

What to Trend Over Time Versus One-Off Checks

Ferritin, resting heart rate, HRV, and subjective fatigue scores tell their story in trends. A quarterly ferritin check in high-volume seasons can catch slow drift downward before performance sags. CRP makes more sense serially than as a lone snapshot. CK helps when compared to your personal baseline, not a generic reference interval. Thyroid markers are most helpful when low energy availability is suspected; repeating them once the energy gap closes can confirm the mechanism. One-off labs shine for ruling out look-alikes like mono, Lyme, or overt anemia. What if fatigue isn’t from training at all?

When Fatigue Is Not Training

Sleep apnea, shift work, chronic infections, depression, and medication effects are common fatigue drivers. Iron deficiency can stem from gastrointestinal blood loss, not just training. Thyroid disease, diabetes, and autoimmune conditions mimic overtraining in their early phases. If CRP is high without obvious training stress, or if anemia appears despite adequate iron intake, the next step is medical evaluation rather than training tweaks. Knowing when the signal points outside the gym keeps you safe and effective. Want a practical way to connect symptoms, sessions, and labs?

Putting It Together: Three Useful Testing Maps

The Endurance Dip: Slower Pace at Same Heart Rate

Start with iron studies (ferritin, transferrin saturation), CBC, and CRP on a rest day. Add morning cortisol and thyroid panel if sleep and mood are off or if low energy availability is on the table. If ferritin is modestly low with normal CRP, oxygen transport is a likely limiter; if ferritin looks normal but CRP is high, recheck when inflammation settles. Pair the labs with a submaximal field test to anchor physiology to performance. Want the strength-focused view?

The Strength Slump: Sore All Week, Flat Power

Check CK and CRP on a day removed from maximal eccentric work. If CK is chronically high and CRP runs warm, the tissue repair pipeline is overloaded. If hormones and sleep are off, add morning cortisol and consider thyroid if energy is low. Track readiness metrics like HRV to see if the nervous system is lagging the muscles. Looking for the low energy availability pattern?

The Energy Deficit: Cold, Irritable, Menstrual Changes or Low Libido

Run thyroid markers with free T3, iron studies, CBC, and CRP. Consider vitamin D if bone stress or frequent bone pain is in the story. If free T3 trends low with normal TSH and iron is borderline, the body is conserving energy — a hallmark of relative energy deficiency in sport. Repeating the same panel after a period of improved energy availability typically shows the direction of travel. Wondering how reliable these tests are across different labs?

Assay Caveats and Interferences You Should Know

Ferritin rises with inflammation; CRP helps interpret it. Testosterone assays can be inaccurate at low female levels on some immunoassays; mass spectrometry gives better precision. Oral contraceptives raise thyroid binding proteins, nudging total T4 up while free T4 often stays normal. Biotin supplements can interfere with certain immunoassays, including thyroid and troponin; most labs advise pausing biotin before testing. CK reference ranges vary by lab and population, and values spike after hard sessions. Wearable HRV algorithms differ; focus on your device’s trends, not cross-device comparisons. With those limitations in mind, which recovery levers map cleanly to these biomarkers?

Smart Recovery Levers, Explained Mechanistically

Muscle protein synthesis depends on amino acids and training signals; when CK is persistently high and performance is flat, the repair signal is outpaced by breakdown. Sleep consolidates motor learning and pulses growth hormone, which supports tissue repair; truncated deep sleep leaves the job half-done. Iron supports cytochromes in mitochondria and hemoglobin in red cells; low ferritin throttles ATP production and oxygen delivery, so submaximal efforts feel oddly hard. Glycogen resynthesis requires carbohydrate availability and time; when stores stay low, calcium handling and force output wobble. Autonomic balance shifts with psychological stress, illness, and late caffeine; a falling HRV and higher resting heart rate tell you the nervous system is stuck in a vigilant gear. Thyroid signaling, especially T3, tunes metabolic rate; in low energy availability, the body dials T3 down to conserve, so every hill feels steeper. Which of these pathways feels most relevant to your current season?

Credible Expectations: What Biomarkers Can and Can’t Do

Biomarkers sharpen your map; they don’t steer the car. A normal panel doesn’t invalidate your fatigue, and an abnormal lab doesn’t prove overtraining without the story and the performance data. Research supports using iron studies in endurance athletes, trending CRP with tissue stress, and watching low T3 in energy deficiency, but single cutoffs rarely fit everyone. The sweet spot is pattern recognition: labs plus trends plus how you feel. What pattern is your body showing right now?

Closing Thought

Your training is a stress experiment with you as the principal investigator. The best biomarkers turn that experiment into understandable signals so you can adapt before fatigue becomes a season-long plot twist. What’s the next data point you’ll collect to make the story clearer?

Join Superpower today to access advanced biomarker testing with over 100 lab tests.

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